BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027G04SP1|AL428777
(876 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1779 1734 0.0
>3x_Contig1779
Length = 24855
Score = 1734 bits (874), Expect = 0.0
Identities = 875/876 (99%)
Strand = Plus / Plus
Query: 1 gatctcttgcaaatttcacagctacaacgaaaatgttcaatgcagcttccgttgaaacgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18445 gatctcttgcaaatttcacagctacaacgaaaatgttcaatgcagcttccgttgaaacgc 18504
Query: 61 aggatctgatatacgagtagagtagtaagagagcttgaactgaaagaaggccctcacata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18505 aggatctgatatacgagtagagtagtaagagagcttgaactgaaagaaggccctcacata 18564
Query: 121 ctaaagaaattttatggtagtagaaaagactgttttgataacagtcattttcaatttgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18565 ctaaagaaattttatggtagtagaaaagactgttttgataacagtcattttcaatttgga 18624
Query: 181 aaagcttttccggagtaaaatcaagcttatcctttctataatggttagattccattaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18625 aaagcttttccggagtaaaatcaagcttatcctttctataatggttagattccattaaag 18684
Query: 241 aatgtctagcatacaacgaacctaaggatagcagaatgttgacaatcaaatgttccgaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18685 aatgtctagcatacaacgaacctaaggatagcagaatgttgacaatcaaatgttccgaat 18744
Query: 301 atgatatttcttcagctttggaagaaaaatacttctcaaaaattttctgacatgcctttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18745 atgatatttcttcagctttggaagaaaaatacttctcaaaaattttctgacatgcctttg 18804
Query: 361 gttcaatgacattcaagtcctctgccgataataggctatagtaagtctccataattcttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18805 gttcaatgacattcaagtcctctgccgataataggctatagtaagtctccataattcttt 18864
Query: 421 gacacctaatcgagtccggaattggaagcaattgagattcgtcggatatattttttacca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18865 gacacctaatcgagtccggaattggaagcaattgagattcgtcggatatattttttacca 18924
Query: 481 aacgtttcatttgaatgarataccatcttgaaaccatagctttcacaggaactaaaggtc 540
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 18925 aacgtttcatttgaatgaaataccatcttgaaaccatagctttcacaggaactaaaggtc 18984
Query: 541 gcaggtattcatccttgctaatctctggacaaacttttgttctaagccatagtaatgtgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18985 gcaggtattcatccttgctaatctctggacaaacttttgttctaagccatagtaatgtgg 19044
Query: 601 attcggtatattggcacgagttatatctttttggagttgcatgaacttcgctgttcctgc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19045 attcggtatattggcacgagttatatctttttggagttgcatgaacttcgctgttcctgc 19104
Query: 661 ctttggcctcttcagttttaagcgattgttcagacttatttatgaagagttcgcattgtc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19105 ctttggcctcttcagttttaagcgattgttcagacttatttatgaagagttcgcattgtc 19164
Query: 721 ttccaatccaatccaatctagtgcaataatccattagcaaagtcattttccttcctagaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19165 ttccaatccaatccaatctagtgcaataatccattagcaaagtcattttccttcctagaa 19224
Query: 781 tatcaattttattatccaagacggatagttgtccctgagtgaccatcccttccaaagaag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19225 tatcaattttattatccaagacggatagttgtccctgagtgaccatcccttccaaagaag 19284
Query: 841 aattacctacgggatcattatgatgatcacgatgct 876
||||||||||||||||||||||||||||||||||||
Sbjct: 19285 aattacctacgggatcattatgatgatcacgatgct 19320
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7251
Number of Sequences: 1807
Number of extensions: 7251
Number of successful extensions: 29
Number of sequences better than 1.0e-20: 1
length of query: 876
length of database: 10,358,551
effective HSP length: 16
effective length of query: 860
effective length of database: 10,329,639
effective search space: 8883489540
effective search space used: 8883489540
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)